I am taking Fenofibrate 54MG and I am having problems with itching at night?

Do you have a rash as well?

I would suggest you see the doctor though, just to get checked out.

The link below has list of known side effects of fenofibrate:

Check with your doctor if any of these most COMMON side effects persist or become bothersome when using Fenofibrate:

Headache; nausea.

Seek medical attention right away if any of these SEVERE side effects occur when using Fenofibrate:

Severe allergic reactions (rash; hives; itching; difficulty breathing; tightness in the chest; swelling of the mouth, face, lips, or tongue); chest pain; chills or sore throat; coughing; dark urine; fever; muscle pain, tenderness, or weakness; pale stools; red, swollen, blistered or peeling skin; severe or persistent dizziness or lightheadedness; severe or persistent nausea, stomach pain, or vomiting; severe pain or swelling in the ankles, feet, or legs; shortness of breath; unusual bruising or bleeding; yellowing of the skin or eyes.

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http://www.drugs.com/sfx/fenofibrate-side-effects.html